STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tadAConserved hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (156 aa)    
Predicted Functional Partners:
grk
Glycerate kinase, putative; GC: 49.78%; Codon Adaptation Index (CAI): 0.752. Curator(s): L. Ozaki; Protein involved in organic acid phosphorylation; Belongs to the glycerate kinase type-1 family.
 
      0.679
fabF
Beta-ketoacyl-ACP synthase II (3-oxoacyl-(Acyl-carrier-protein) synthase II), putative; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
  
 0.640
rsmI
Conserved uncharacterized protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
 
    
 0.592
fabD
Malonyl-CoA:ACP transacylase, putative; GC: 44.95%; Codon Adaptation Index (CAI): 0.784; Protein involved in transferase activity.
  
  
 0.585
acpP
Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.543
purA
Adenylosuccinate synthetase, putative; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
     
 0.538
acp
Acyl carrier protein, putative; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.511
phaB
Enoyl-CoA hydratase/carnithine racemase, putative; GC: 43.69%; Codon Adaptation Index (CAI): 0.819. Curator(s): J. Alves; Protein involved in lyase activity and metabolism.
  
  
 0.454
SSA_1540
Conserved hypothetical protein; GC: 41.81%; Codon Adaptation Index (CAI): 0.814; Protein involved in zinc ion binding.
       0.450
mvaS
Hydroxymethylglutaryl-CoA synthase, putative; GC: 47.16%; Codon Adaptation Index (CAI): 0.76. Helix-turn-helix prediction: AraC. Curator(s): T. Kitten; Protein involved in acetyl-CoA metabolism.
  
  
 0.448
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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