STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_2193ADP-ribose pyrophosphatase, putative; GC: 47.38%; Codon Adaptation Index (CAI): 0.748. Curator(s): J. Alves; Protein involved in hydrolase activity. (260 aa)    
Predicted Functional Partners:
nadR
ATPase/kinase, putative; GC: 45.33%; Codon Adaptation Index (CAI): 0.804. Possibly involved in NAD metabolism. Curator(s): J. Alves; Protein involved in nucleotidyltransferase activity and regulation of transcription.
       0.647
SSA_2194
Nicotinamide mononucleotide transporter, putative; GC: 47.43%; Transporter classification TC:9.A.4.1.1. Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.76. Curator(s): J. Alves.
     
 0.645
kptA
RNA:NAD 2'-phosphotransferase, putative; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
     0.592
SSA_2192
Conserved uncharacterized protein; GC: 45.07%; Codon Adaptation Index (CAI): 0.793. LipoP prediction: SpII. SignalP prediction: Yes (prob. 0.995); Curator(s): T. Kitten, J. Alves.
       0.477
SSA_2189
Conserved hypothetical protein; GC: 47.86%; Codon Adaptation Index (CAI): 0.778; Protein involved in ADP-ribosyl-[dinitrogen reductase] hydrolase activity and hydrolase activity.
 
     0.431
SSA_2198
Conserved hypothetical protein; GC: 47.31%; Codon Adaptation Index (CAI): 0.79.
 
     0.428
SSA_1238
Conserved hypothetical protein; GC: 43.69%; Codon Adaptation Index (CAI): 0.806.
  
     0.407
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.