STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_2227Acetyl transferase, putative; GC: 46.7%; Codon Adaptation Index (CAI): 0.758; Protein involved in N-acetyltransferase activity and transferase activity. (181 aa)    
Predicted Functional Partners:
nrdG
Organic radical activating chaperone, putative; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
       0.805
SSA_2228
Acetyltransferase (GNAT) family, putative; GC: 49.4%; Codon Adaptation Index (CAI): 0.741. Curator(s): J. Alves; Protein involved in N-acetyltransferase activity and transferase activity.
 
    
0.782
nrdD
Ribonucleotide reductase, class III, anaerobic, putative; GC: 48.63%; Codon Adaptation Index (CAI): 0.764; Protein involved in ribonucleoside-triphosphate reductase activity and metabolism.
       0.669
SSA_2229
Conserved hypothetical protein; GC: 40.8%; Codon Adaptation Index (CAI): 0.789.
       0.612
SSA_1227
Aminoglycoside adenylyltransferase, putative; GC: 47.62%; Codon Adaptation Index (CAI): 0.747; Protein involved in nucleotidyltransferase activity.
 
     0.491
SSA_2231
Heme/copper-type cytochrome/quinol oxidases, subunit 1, putative; GC: 45.16%; Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.783.
       0.453
SSA_2224
Phosphotyrosine-protein phosphatase, putative; GC: 44.81%; Codon Adaptation Index (CAI): 0.774; Protein involved in hydrolase activity.
       0.451
SSA_2222
Tyrosine-protein kinase Wze, putative; GC: 45.06%; Transporter classification TC:8.A.3.2.2. Codon Adaptation Index (CAI): 0.757. Curator(s): J. Alves; Protein involved in capsule polysaccharide biosynthesis.
       0.447
SSA_2223
Capsular polysaccharide biosynthesis protein Wzd (chain length regulator), putative; GC: 46.12%; Transporter classification TC:8.A.3.2.1. Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.787. Curator(s): J. Alves.
       0.443
cpsA
Transcriptional attenuator LytR, putative; GC: 43.61%; Transmembrane domains: 3. Codon Adaptation Index (CAI): 0.774. SignalP prediction: Yes (prob. 0.997). Capsular polysaccharide biosynthesis transcriptional attenuator. Curator(s): J. Alves; Protein involved in DNA replication.
       0.443
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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