Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SSA_2231Heme/copper-type cytochrome/quinol oxidases, subunit 1, putative; GC: 45.16%; Transmembrane domains: 10. Codon Adaptation Index (CAI): 0.783. (515 aa)    
Predicted Functional Partners:
SSA_2233
Hypothetical protein; GC: 43.06%; Codon Adaptation Index (CAI): 0.726. Helix-turn-helix prediction: AraC.
       0.651
nrdD
Ribonucleotide reductase, class III, anaerobic, putative; GC: 48.63%; Codon Adaptation Index (CAI): 0.764; Protein involved in ribonucleoside-triphosphate reductase activity and metabolism.
       0.635
nrdG
Organic radical activating chaperone, putative; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
       0.630
SSA_2239
Conserved uncharacterized cytosolic protein; GC: 41.67%; Codon Adaptation Index (CAI): 0.813; Belongs to the UPF0473 family.
       0.532
SSA_2240
Holliday junction resolvase, putative; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
       0.529
SSA_2241
Conserved uncharacterized protein; GC: 41.95%; Codon Adaptation Index (CAI): 0.781. Curator(s): J. Alves; Protein involved in molecular function unknown; Belongs to the UPF0297 family.
       0.529
cls
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
       0.463
SSA_2227
Acetyl transferase, putative; GC: 46.7%; Codon Adaptation Index (CAI): 0.758; Protein involved in N-acetyltransferase activity and transferase activity.
       0.453
SSA_2228
Acetyltransferase (GNAT) family, putative; GC: 49.4%; Codon Adaptation Index (CAI): 0.741. Curator(s): J. Alves; Protein involved in N-acetyltransferase activity and transferase activity.
       0.453
SpxA
Arsenate reductase, putative; GC: 38.6%; Codon Adaptation Index (CAI): 0.817; Protein involved in oxidoreductase activity; Belongs to the ArsC family.
       0.446
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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