Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SSA_2235Conserved uncharacterized protein; GC: 48.75%; Codon Adaptation Index (CAI): 0.798. LipoP prediction: SpII. SignalP prediction: Yes (prob. 1). (159 aa)    
Predicted Functional Partners:
SSA_2237
Dihydrofolate:folylpolyglutamate synthetase, putative; GC: 48.66%; Codon Adaptation Index (CAI): 0.763; Belongs to the folylpolyglutamate synthase family.
       0.655
cls
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
       0.644
SSA_2239
Conserved uncharacterized cytosolic protein; GC: 41.67%; Codon Adaptation Index (CAI): 0.813; Belongs to the UPF0473 family.
       0.570
SSA_2240
Holliday junction resolvase, putative; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
       0.509
SSA_2241
Conserved uncharacterized protein; GC: 41.95%; Codon Adaptation Index (CAI): 0.781. Curator(s): J. Alves; Protein involved in molecular function unknown; Belongs to the UPF0297 family.
       0.504
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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