SSA_2269 protein (Streptococcus sanguinis SK36)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

SSA_2269

Conserved hypothetical protein; GC: 44.44%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998). (311 aa)

Predicted Functional Partners:

aspRS2

0.855

SSA_1723

0.578

SSA_2271

0.537

hisS

0.527

nrdI

0.449

Your Current Organism:

Streptococcus sanguinis SK36

NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SSA_1723	SSA_2269	SSA_1723	SSA_2269	Conserved hypothetical protein; GC: 43.47%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.759.	Conserved hypothetical protein; GC: 44.44%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).	0.578
SSA_1723	aspRS2	SSA_1723	SSA_2270	Conserved hypothetical protein; GC: 43.47%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.759.	Aspartyl-tRNA synthetase, putative; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.	0.450
SSA_1723	hisS	SSA_1723	SSA_2284	Conserved hypothetical protein; GC: 43.47%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.759.	Histidyl-tRNA synthetase, putative; GC: 47.23%; Codon Adaptation Index (CAI): 0.785; Protein involved in histidyl-tRNA aminoacylation.	0.450
SSA_2269	SSA_1723	SSA_2269	SSA_1723	Conserved hypothetical protein; GC: 44.44%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).	Conserved hypothetical protein; GC: 43.47%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.759.	0.578
SSA_2269	SSA_2271	SSA_2269	SSA_2271	Conserved hypothetical protein; GC: 44.44%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).	Conserved hypothetical protein; GC: 45.54%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.748. SignalP prediction: Yes (prob. 0.791); Curator(s): T. Kitten.	0.537
SSA_2269	aspRS2	SSA_2269	SSA_2270	Conserved hypothetical protein; GC: 44.44%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).	Aspartyl-tRNA synthetase, putative; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.	0.855
SSA_2269	hisS	SSA_2269	SSA_2284	Conserved hypothetical protein; GC: 44.44%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).	Histidyl-tRNA synthetase, putative; GC: 47.23%; Codon Adaptation Index (CAI): 0.785; Protein involved in histidyl-tRNA aminoacylation.	0.527
SSA_2269	nrdI	SSA_2269	SSA_2263	Conserved hypothetical protein; GC: 44.44%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).	Ribonucleotide reductase (NrdI family protein), putative; GC: 43.56%; Codon Adaptation Index (CAI): 0.824. Curator(s): J. Alves; Belongs to the NrdI family.	0.449
SSA_2271	SSA_2269	SSA_2271	SSA_2269	Conserved hypothetical protein; GC: 45.54%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.748. SignalP prediction: Yes (prob. 0.791); Curator(s): T. Kitten.	Conserved hypothetical protein; GC: 44.44%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).	0.537
SSA_2271	aspRS2	SSA_2271	SSA_2270	Conserved hypothetical protein; GC: 45.54%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.748. SignalP prediction: Yes (prob. 0.791); Curator(s): T. Kitten.	Aspartyl-tRNA synthetase, putative; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.	0.552
aspRS2	SSA_1723	SSA_2270	SSA_1723	Aspartyl-tRNA synthetase, putative; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.	Conserved hypothetical protein; GC: 43.47%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.759.	0.450
aspRS2	SSA_2269	SSA_2270	SSA_2269	Aspartyl-tRNA synthetase, putative; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.	Conserved hypothetical protein; GC: 44.44%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).	0.855
aspRS2	SSA_2271	SSA_2270	SSA_2271	Aspartyl-tRNA synthetase, putative; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.	Conserved hypothetical protein; GC: 45.54%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.748. SignalP prediction: Yes (prob. 0.791); Curator(s): T. Kitten.	0.552
aspRS2	hisS	SSA_2270	SSA_2284	Aspartyl-tRNA synthetase, putative; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.	Histidyl-tRNA synthetase, putative; GC: 47.23%; Codon Adaptation Index (CAI): 0.785; Protein involved in histidyl-tRNA aminoacylation.	0.960
aspRS2	nrdI	SSA_2270	SSA_2263	Aspartyl-tRNA synthetase, putative; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.	Ribonucleotide reductase (NrdI family protein), putative; GC: 43.56%; Codon Adaptation Index (CAI): 0.824. Curator(s): J. Alves; Belongs to the NrdI family.	0.449
hisS	SSA_1723	SSA_2284	SSA_1723	Histidyl-tRNA synthetase, putative; GC: 47.23%; Codon Adaptation Index (CAI): 0.785; Protein involved in histidyl-tRNA aminoacylation.	Conserved hypothetical protein; GC: 43.47%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.759.	0.450
hisS	SSA_2269	SSA_2284	SSA_2269	Histidyl-tRNA synthetase, putative; GC: 47.23%; Codon Adaptation Index (CAI): 0.785; Protein involved in histidyl-tRNA aminoacylation.	Conserved hypothetical protein; GC: 44.44%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).	0.527
hisS	aspRS2	SSA_2284	SSA_2270	Histidyl-tRNA synthetase, putative; GC: 47.23%; Codon Adaptation Index (CAI): 0.785; Protein involved in histidyl-tRNA aminoacylation.	Aspartyl-tRNA synthetase, putative; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.	0.960
nrdI	SSA_2269	SSA_2263	SSA_2269	Ribonucleotide reductase (NrdI family protein), putative; GC: 43.56%; Codon Adaptation Index (CAI): 0.824. Curator(s): J. Alves; Belongs to the NrdI family.	Conserved hypothetical protein; GC: 44.44%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).	0.449
nrdI	aspRS2	SSA_2263	SSA_2270	Ribonucleotide reductase (NrdI family protein), putative; GC: 43.56%; Codon Adaptation Index (CAI): 0.824. Curator(s): J. Alves; Belongs to the NrdI family.	Aspartyl-tRNA synthetase, putative; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.	0.449

Server load: low (26%) [HD]

Permalink

Network

Neighborhood

Textmining

Co-occurrence

Experiments

Co-expression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About