STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_2271Conserved hypothetical protein; GC: 45.54%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.748. SignalP prediction: Yes (prob. 0.791); Curator(s): T. Kitten. (70 aa)    
Predicted Functional Partners:
aspRS2
Aspartyl-tRNA synthetase, putative; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.
       0.552
SSA_2269
Conserved hypothetical protein; GC: 44.44%; Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.773. LipoP prediction: SpI. SignalP prediction: Yes (prob. 0.998).
       0.537
SSA_2272
Conserved hypothetical protein; GC: 34%; Codon Adaptation Index (CAI): 0.792.
       0.497
SSA_2273
Hypothetical protein; GC: 32.14%; Transmembrane domains: 4. Codon Adaptation Index (CAI): 0.757.
       0.466
SSA_2274
Conserved hypothetical protein; GC: 40.81%; Codon Adaptation Index (CAI): 0.759. Helix-turn-helix prediction: AraC.
       0.466
SSA_2275
Hypothetical protein; GC: 37.43%; Codon Adaptation Index (CAI): 0.746.
       0.466
SSA_2276
Conserved hypothetical protein; GC: 42.12%; Codon Adaptation Index (CAI): 0.758.
       0.466
SSA_2277
DNA segregation ATPase FtsK/SpoIIIE family protein, putative; GC: 49.69%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.747. Helix-turn-helix prediction: AraC. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.
       0.466
ukp
Ukp protein, putative; GC: 45.48%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.791.
       0.466
SSA_2279
Conserved hypothetical protein; GC: 42.92%; Codon Adaptation Index (CAI): 0.815.
       0.466
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.