STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_2283Conserved uncharacterized protein; GC: 35.76%; Codon Adaptation Index (CAI): 0.829. Curator(s): J. Alves; Belongs to the WXG100 family. (95 aa)    
Predicted Functional Partners:
SSA_2277
DNA segregation ATPase FtsK/SpoIIIE family protein, putative; GC: 49.69%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.747. Helix-turn-helix prediction: AraC. Curator(s): J. Alves; Protein involved in nucleoside-triphosphatase activity.
 
 
 0.974
ukp
Ukp protein, putative; GC: 45.48%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.791.
 
  
 0.961
SSA_2282
Phage infection protein, putative; GC: 40.76%; Transmembrane domains: 6. Codon Adaptation Index (CAI): 0.795. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).
 
   
 0.934
SSA_2272
Conserved hypothetical protein; GC: 34%; Codon Adaptation Index (CAI): 0.792.
 
     0.754
ftsK
DNA translocase ftsK, putative; GC: 48.15%; Transporter classification TC:3.A.12.1.1. Transmembrane domains: 5. Codon Adaptation Index (CAI): 0.772. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1); Helix-turn-helix prediction: AraC. Curator(s): J. Alves; Protein involved in cell division; Belongs to the FtsK/SpoIIIE/SftA family.
  
 
 0.727
SSA_2292
DNA segregation ATPase FtsK/SpoIIIE-like protein, putative; GC: 40.24%; Codon Adaptation Index (CAI): 0.745. Helix-turn-helix prediction: AraC. Curator(s): J. Alves.
  
 
 0.727
SSA_2279
Conserved hypothetical protein; GC: 42.92%; Codon Adaptation Index (CAI): 0.815.
     
 0.673
SSA_1387
Conserved hypothetical protein; GC: 30.33%; Codon Adaptation Index (CAI): 0.778. Curator(s): J. Alves.
 
     0.543
SSA_2281
Conserved hypothetical protein; GC: 43.14%; Transmembrane domains: 2. Codon Adaptation Index (CAI): 0.743. LipoP prediction: SpI. SignalP prediction: Yes (prob. 1).
       0.532
SSA_0159
Conserved hypothetical protein; GC: 40.92%; Transmembrane domains: 7. Codon Adaptation Index (CAI): 0.785. Curator(s): M. Serrano, J. Alves.
 
     0.530
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.