STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSA_2293Conserved hypothetical protein; GC: 37.95%; Transmembrane domains: 1. Codon Adaptation Index (CAI): 0.711. SignalP prediction: Yes (prob. 0.497); Helix-turn-helix prediction: AraC. (201 aa)    
Predicted Functional Partners:
SSA_2292
DNA segregation ATPase FtsK/SpoIIIE-like protein, putative; GC: 40.24%; Codon Adaptation Index (CAI): 0.745. Helix-turn-helix prediction: AraC. Curator(s): J. Alves.
       0.855
SSA_2294
Conserved hypothetical protein; GC: 38.45%; Codon Adaptation Index (CAI): 0.745; Protein involved in DNA replication.
       0.676
Your Current Organism:
Streptococcus sanguinis SK36
NCBI taxonomy Id: 388919
Other names: S. sanguinis SK36, Streptococcus sanguinis str. SK36, Streptococcus sanguinis strain SK36
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.