STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001611675_00108Unannotated protein. (484 aa)    
Predicted Functional Partners:
GCA_001611675_00107
Unannotated protein.
 
  
 0.945
GCA_001611675_00109
Unannotated protein.
 
  
 0.937
GCA_001611675_00106
Unannotated protein.
 
     0.915
GCA_001611675_03118
Unannotated protein.
  
  
 0.906
GCA_001611675_00110
Unannotated protein.
 
   
 0.891
GCA_001611675_00105
Unannotated protein.
 
  
 0.851
GCA_001611675_00111
Unannotated protein.
 
   
 0.850
GCA_001611675_00113
Unannotated protein.
 
 
  0.835
GCA_001611675_00104
Unannotated protein.
 
     0.737
GCA_001611675_00114
Unannotated protein.
 
   
 0.574
Your Current Organism:
Pontibacter akesuensis
NCBI taxonomy Id: 388950
Other names: CCTCC AB 206086, KCTC 12758, P. akesuensis, Pontibacter akesuensis Zhou et al. 2007 emend. Zhang et al. 2013, strain AKS 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.