STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001611675_00536Unannotated protein. (173 aa)    
Predicted Functional Partners:
speH
Unannotated protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the spermidine/spermine synthase family.
    
  0.624
GCA_001611675_00534
Unannotated protein.
       0.615
GCA_001611675_00535
Unannotated protein.
       0.615
GCA_001611675_00537
Unannotated protein.
       0.486
GCA_001611675_00538
Unannotated protein.
       0.482
GCA_001611675_00539
Unannotated protein.
       0.468
tal-2
Unannotated protein; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
   
 
  0.438
GCA_001611675_03530
Unannotated protein.
    
   0.416
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
     
 0.402
Your Current Organism:
Pontibacter akesuensis
NCBI taxonomy Id: 388950
Other names: CCTCC AB 206086, KCTC 12758, P. akesuensis, Pontibacter akesuensis Zhou et al. 2007 emend. Zhang et al. 2013, strain AKS 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.