STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001611675_01479Unannotated protein. (184 aa)    
Predicted Functional Partners:
rimO
Unannotated protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.788
ftsY
Unannotated protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.788
GCA_001611675_01556
Unannotated protein.
  
     0.704
GCA_001611675_01918
Unannotated protein.
  
     0.657
GCA_001611675_02408
Unannotated protein.
  
     0.647
GCA_001611675_03046
Unannotated protein.
  
     0.641
GCA_001611675_00162
Unannotated protein.
  
     0.612
GCA_001611675_01481
Unannotated protein.
 
     0.609
GCA_001611675_01067
Unannotated protein.
  
     0.578
GCA_001611675_00283
Unannotated protein.
  
     0.548
Your Current Organism:
Pontibacter akesuensis
NCBI taxonomy Id: 388950
Other names: CCTCC AB 206086, KCTC 12758, P. akesuensis, Pontibacter akesuensis Zhou et al. 2007 emend. Zhang et al. 2013, strain AKS 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.