STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001611675_03297Unannotated protein. (805 aa)    
Predicted Functional Partners:
GCA_001611675_02607
Unannotated protein.
    
   0.549
GCA_001611675_00413
Unannotated protein; Belongs to the peptidase S8 family.
   
  0.539
GCA_001611675_00414
Unannotated protein; Belongs to the peptidase S8 family.
   
  0.539
GCA_001611675_03263
Unannotated protein.
   
  0.539
GCA_001611675_01765
Unannotated protein.
  
 
   0.536
GCA_001611675_03131
Unannotated protein.
  
 
  0.514
GCA_001611675_01619
Unannotated protein.
  
 
  0.502
GCA_001611675_01706
Unannotated protein.
  
  
  0.494
GCA_001611675_01059
Unannotated protein.
  
 
  0.487
GCA_001611675_02676
Unannotated protein.
    
   0.487
Your Current Organism:
Pontibacter akesuensis
NCBI taxonomy Id: 388950
Other names: CCTCC AB 206086, KCTC 12758, P. akesuensis, Pontibacter akesuensis Zhou et al. 2007 emend. Zhang et al. 2013, strain AKS 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.