STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001611675_03815Unannotated protein. (120 aa)    
Predicted Functional Partners:
GCA_001611675_02024
Unannotated protein; Belongs to the Fur family.
  
    0.703
GCA_001611675_02709
Unannotated protein; Belongs to the Fur family.
  
    0.703
GCA_001611675_01512
Unannotated protein.
  
     0.639
GCA_001611675_01605
Unannotated protein; Belongs to the methylenetetrahydrofolate reductase family.
  
  
  0.588
GCA_001611675_03816
Unannotated protein.
 
     0.569
GCA_001611675_01954
Unannotated protein.
  
     0.563
GCA_001611675_01573
Unannotated protein.
  
     0.560
GCA_001611675_00668
Unannotated protein.
  
     0.528
GCA_001611675_01575
Unannotated protein.
  
     0.508
GCA_001611675_03606
Unannotated protein.
  
     0.489
Your Current Organism:
Pontibacter akesuensis
NCBI taxonomy Id: 388950
Other names: CCTCC AB 206086, KCTC 12758, P. akesuensis, Pontibacter akesuensis Zhou et al. 2007 emend. Zhang et al. 2013, strain AKS 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.