node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PNK_0364 | dinG | PNK_0364 | PNK_0174 | Hypothetical protein. | Putative ATP-dependent helicase dinG. | 0.532 |
PNK_0364 | dnaN | PNK_0364 | PNK_0926 | Hypothetical protein. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.589 |
PNK_0364 | mreB | PNK_0364 | PNK_0365 | Hypothetical protein. | Actin-like ATPase involved in cell morphogenesis. | 0.640 |
PNK_0364 | polA | PNK_0364 | PNK_0226 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.790 |
PNK_0364 | recA | PNK_0364 | PNK_0003 | Hypothetical protein. | Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.511 |
PNK_0364 | recQ | PNK_0364 | PNK_0741 | Hypothetical protein. | ATP-dependent DNA helicase RecQ. | 0.563 |
PNK_0364 | rpoA | PNK_0364 | PNK_1939 | Hypothetical protein. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.762 |
PNK_0364 | rpoB | PNK_0364 | PNK_1708 | Hypothetical protein. | DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.766 |
PNK_0364 | rpoC | PNK_0364 | PNK_1707 | Hypothetical protein. | DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.602 |
PNK_0364 | topA | PNK_0364 | PNK_0060 | Hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.850 |
dinG | PNK_0364 | PNK_0174 | PNK_0364 | Putative ATP-dependent helicase dinG. | Hypothetical protein. | 0.532 |
dinG | dnaN | PNK_0174 | PNK_0926 | Putative ATP-dependent helicase dinG. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.818 |
dinG | polA | PNK_0174 | PNK_0226 | Putative ATP-dependent helicase dinG. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.911 |
dinG | recA | PNK_0174 | PNK_0003 | Putative ATP-dependent helicase dinG. | Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.577 |
dinG | recQ | PNK_0174 | PNK_0741 | Putative ATP-dependent helicase dinG. | ATP-dependent DNA helicase RecQ. | 0.634 |
dinG | rpoA | PNK_0174 | PNK_1939 | Putative ATP-dependent helicase dinG. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.984 |
dinG | rpoB | PNK_0174 | PNK_1708 | Putative ATP-dependent helicase dinG. | DNA-directed RNA polymerase beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.977 |
dinG | rpoC | PNK_0174 | PNK_1707 | Putative ATP-dependent helicase dinG. | DNA-directed RNA polymerase beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.913 |
dinG | topA | PNK_0174 | PNK_0060 | Putative ATP-dependent helicase dinG. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.578 |
dnaN | PNK_0364 | PNK_0926 | PNK_0364 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein. | 0.589 |