Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PNK_0662 | PNK_0663 | PNK_0662 | PNK_0663 | Putative outer membrane efflux protein, NodT family. | Putative HlyD family protein. | 0.898 |
PNK_0662 | PNK_0664 | PNK_0662 | PNK_0664 | Putative outer membrane efflux protein, NodT family. | Putative ABC transporter, ATPase subunit. | 0.850 |
PNK_0662 | PNK_0665 | PNK_0662 | PNK_0665 | Putative outer membrane efflux protein, NodT family. | Hypothetical protein. | 0.868 |
PNK_0662 | dhcr7 | PNK_0662 | PNK_0661 | Putative outer membrane efflux protein, NodT family. | 7-dehydrocholesterol reductase. | 0.512 |
PNK_0663 | PNK_0662 | PNK_0663 | PNK_0662 | Putative HlyD family protein. | Putative outer membrane efflux protein, NodT family. | 0.898 |
PNK_0663 | PNK_0664 | PNK_0663 | PNK_0664 | Putative HlyD family protein. | Putative ABC transporter, ATPase subunit. | 0.907 |
PNK_0663 | PNK_0665 | PNK_0663 | PNK_0665 | Putative HlyD family protein. | Hypothetical protein. | 0.966 |
PNK_0663 | PNK_0991 | PNK_0663 | PNK_0991 | Putative HlyD family protein. | Putative outer membrane efflux protein. | 0.543 |
PNK_0663 | PNK_1211 | PNK_0663 | PNK_1211 | Putative HlyD family protein. | Outer membrane protein. | 0.545 |
PNK_0663 | PNK_1417 | PNK_0663 | PNK_1417 | Putative HlyD family protein. | Putative outer membrane efflux protein family. | 0.565 |
PNK_0663 | PNK_2020 | PNK_0663 | PNK_2020 | Putative HlyD family protein. | Conserved hypothetical protein. | 0.519 |
PNK_0663 | PNK_2410 | PNK_0663 | PNK_2410 | Putative HlyD family protein. | Conserved putative membrane protein. | 0.472 |
PNK_0663 | czcC | PNK_0663 | PNK_0425 | Putative HlyD family protein. | Cation efflux system membrane protein C. | 0.601 |
PNK_0663 | dhcr7 | PNK_0663 | PNK_0661 | Putative HlyD family protein. | 7-dehydrocholesterol reductase. | 0.509 |
PNK_0664 | PNK_0662 | PNK_0664 | PNK_0662 | Putative ABC transporter, ATPase subunit. | Putative outer membrane efflux protein, NodT family. | 0.850 |
PNK_0664 | PNK_0663 | PNK_0664 | PNK_0663 | Putative ABC transporter, ATPase subunit. | Putative HlyD family protein. | 0.907 |
PNK_0664 | PNK_0665 | PNK_0664 | PNK_0665 | Putative ABC transporter, ATPase subunit. | Hypothetical protein. | 0.947 |
PNK_0664 | dhcr7 | PNK_0664 | PNK_0661 | Putative ABC transporter, ATPase subunit. | 7-dehydrocholesterol reductase. | 0.514 |
PNK_0665 | PNK_0662 | PNK_0665 | PNK_0662 | Hypothetical protein. | Putative outer membrane efflux protein, NodT family. | 0.868 |
PNK_0665 | PNK_0663 | PNK_0665 | PNK_0663 | Hypothetical protein. | Putative HlyD family protein. | 0.966 |
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