STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNK_0723Conserved putative membrane protein. (370 aa)    
Predicted Functional Partners:
PNK_0724
Putative sensory histidine kinase.
       0.773
PNK_2229
Conserved hypothetical protein.
  
     0.754
PNK_1150
Hypothetical protein.
  
     0.750
PNK_1512
Conserved hypothetical protein.
  
     0.743
PNK_0995
Hypothetical protein.
  
     0.738
PNK_1230
Conserved putative membrane protein.
  
     0.710
PNK_1367
Hypothetical protein.
  
     0.707
PNK_2242
Hypothetical protein.
  
     0.692
PNK_0077
Conserved hypothetical protein.
  
     0.689
PNK_2284
Hypothetical protein.
  
     0.674
Your Current Organism:
Protochlamydia naegleriophila
NCBI taxonomy Id: 389348
Other names: C. Protochlamydia naegleriophila, Candidatus Protochlamydia naegleriophila, strain KNic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.