Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PNK_0727 | PNK_0894 | PNK_0727 | PNK_0894 | Conserved hypothetical membrane protein. | Conserved hypothetical protein. | 0.528 |
PNK_0727 | PNK_1227 | PNK_0727 | PNK_1227 | Conserved hypothetical membrane protein. | Transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.458 |
PNK_0727 | aaaT | PNK_0727 | PNK_0895 | Conserved hypothetical membrane protein. | Neutral amino acid (glutamate) transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.458 |
PNK_0727 | putA | PNK_0727 | PNK_2312 | Conserved hypothetical membrane protein. | Bifunctional protein (proline dehydrogenase and delta-1-pyrroline-5-carboxylate dehydrogenase); Belongs to the aldehyde dehydrogenase family. | 0.586 |
PNK_0894 | PNK_0727 | PNK_0894 | PNK_0727 | Conserved hypothetical protein. | Conserved hypothetical membrane protein. | 0.528 |
PNK_0894 | aaaT | PNK_0894 | PNK_0895 | Conserved hypothetical protein. | Neutral amino acid (glutamate) transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.500 |
PNK_1227 | PNK_0727 | PNK_1227 | PNK_0727 | Transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Conserved hypothetical membrane protein. | 0.458 |
PNK_1227 | aaaT | PNK_1227 | PNK_0895 | Transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Neutral amino acid (glutamate) transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.695 |
PNK_1227 | putA | PNK_1227 | PNK_2312 | Transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Bifunctional protein (proline dehydrogenase and delta-1-pyrroline-5-carboxylate dehydrogenase); Belongs to the aldehyde dehydrogenase family. | 0.591 |
aaaT | PNK_0727 | PNK_0895 | PNK_0727 | Neutral amino acid (glutamate) transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Conserved hypothetical membrane protein. | 0.458 |
aaaT | PNK_0894 | PNK_0895 | PNK_0894 | Neutral amino acid (glutamate) transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Conserved hypothetical protein. | 0.500 |
aaaT | PNK_1227 | PNK_0895 | PNK_1227 | Neutral amino acid (glutamate) transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.695 |
aaaT | putA | PNK_0895 | PNK_2312 | Neutral amino acid (glutamate) transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Bifunctional protein (proline dehydrogenase and delta-1-pyrroline-5-carboxylate dehydrogenase); Belongs to the aldehyde dehydrogenase family. | 0.591 |
putA | PNK_0727 | PNK_2312 | PNK_0727 | Bifunctional protein (proline dehydrogenase and delta-1-pyrroline-5-carboxylate dehydrogenase); Belongs to the aldehyde dehydrogenase family. | Conserved hypothetical membrane protein. | 0.586 |
putA | PNK_1227 | PNK_2312 | PNK_1227 | Bifunctional protein (proline dehydrogenase and delta-1-pyrroline-5-carboxylate dehydrogenase); Belongs to the aldehyde dehydrogenase family. | Transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.591 |
putA | aaaT | PNK_2312 | PNK_0895 | Bifunctional protein (proline dehydrogenase and delta-1-pyrroline-5-carboxylate dehydrogenase); Belongs to the aldehyde dehydrogenase family. | Neutral amino acid (glutamate) transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.591 |