Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PNK_0135 | PNK_1139 | PNK_0135 | PNK_1139 | Trehalose synthase. | Putative cationic amino acid transport protein. | 0.574 |
| PNK_0135 | glgE | PNK_0135 | PNK_0134 | Trehalose synthase. | Putative glycosidase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.985 |
| PNK_1138 | PNK_1139 | PNK_1138 | PNK_1139 | Peptidase C26 family protein. | Putative cationic amino acid transport protein. | 0.818 |
| PNK_1139 | PNK_0135 | PNK_1139 | PNK_0135 | Putative cationic amino acid transport protein. | Trehalose synthase. | 0.574 |
| PNK_1139 | PNK_1138 | PNK_1139 | PNK_1138 | Putative cationic amino acid transport protein. | Peptidase C26 family protein. | 0.818 |
| PNK_1139 | aroA | PNK_1139 | PNK_1233 | Putative cationic amino acid transport protein. | Putative 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the EPSP synthase family. Belongs to the type-I 3-dehydroquinase family. | 0.514 |
| PNK_1139 | glgE | PNK_1139 | PNK_0134 | Putative cationic amino acid transport protein. | Putative glycosidase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | 0.574 |
| aroA | PNK_1139 | PNK_1233 | PNK_1139 | Putative 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the EPSP synthase family. Belongs to the type-I 3-dehydroquinase family. | Putative cationic amino acid transport protein. | 0.514 |
| glgE | PNK_0135 | PNK_0134 | PNK_0135 | Putative glycosidase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | Trehalose synthase. | 0.985 |
| glgE | PNK_1139 | PNK_0134 | PNK_1139 | Putative glycosidase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. | Putative cationic amino acid transport protein. | 0.574 |