Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
PNK_0026 | PNK_1293 | Hypothetical protein. | TauD domain-containing protein. | 0.467 |
PNK_0026 | PNK_1294 | Hypothetical protein. | Methyltransferase. | 0.404 |
PNK_0026 | PNK_1295 | Hypothetical protein. | Putative D-arabinono-1,4-lactone oxidase. | 0.404 |
PNK_0323 | PNK_1292 | Spectinomycin phosphotransferase. | Hypothetical protein; RTX toxins and related Ca2+-binding proteins. | 0.411 |
PNK_0323 | PNK_1294 | Spectinomycin phosphotransferase. | Methyltransferase. | 0.537 |
PNK_0323 | PNK_1295 | Spectinomycin phosphotransferase. | Putative D-arabinono-1,4-lactone oxidase. | 0.513 |
PNK_0323 | PNK_1812 | Spectinomycin phosphotransferase. | Phosphotransferase family protein. | 0.777 |
PNK_1042 | PNK_1294 | Conserved hypothetical protein. | Methyltransferase. | 0.403 |
PNK_1292 | PNK_0323 | Hypothetical protein; RTX toxins and related Ca2+-binding proteins. | Spectinomycin phosphotransferase. | 0.411 |
PNK_1292 | PNK_1293 | Hypothetical protein; RTX toxins and related Ca2+-binding proteins. | TauD domain-containing protein. | 0.497 |
PNK_1292 | PNK_1294 | Hypothetical protein; RTX toxins and related Ca2+-binding proteins. | Methyltransferase. | 0.586 |
PNK_1292 | PNK_1295 | Hypothetical protein; RTX toxins and related Ca2+-binding proteins. | Putative D-arabinono-1,4-lactone oxidase. | 0.436 |
PNK_1292 | PNK_1812 | Hypothetical protein; RTX toxins and related Ca2+-binding proteins. | Phosphotransferase family protein. | 0.435 |
PNK_1293 | PNK_0026 | TauD domain-containing protein. | Hypothetical protein. | 0.467 |
PNK_1293 | PNK_1292 | TauD domain-containing protein. | Hypothetical protein; RTX toxins and related Ca2+-binding proteins. | 0.497 |
PNK_1293 | PNK_1294 | TauD domain-containing protein. | Methyltransferase. | 0.465 |
PNK_1293 | PNK_1295 | TauD domain-containing protein. | Putative D-arabinono-1,4-lactone oxidase. | 0.465 |
PNK_1294 | PNK_0026 | Methyltransferase. | Hypothetical protein. | 0.404 |
PNK_1294 | PNK_0323 | Methyltransferase. | Spectinomycin phosphotransferase. | 0.537 |
PNK_1294 | PNK_1042 | Methyltransferase. | Conserved hypothetical protein. | 0.403 |
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