STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNK_1296Conserved putative membrane protein. (161 aa)    
Predicted Functional Partners:
PNK_1291
Conserved putative membrane protein.
 
     0.664
PNK_1298
Putative antibiotic biosynthesis monooxygenase.
  
     0.539
PNK_1297
Hypothetical protein; Predicted endonuclease containing a URI domain.
       0.533
PNK_0475
Conserved hypothetical secreted protein.
  
     0.490
PNK_1294
Methyltransferase.
       0.465
PNK_1295
Putative D-arabinono-1,4-lactone oxidase.
       0.465
Your Current Organism:
Protochlamydia naegleriophila
NCBI taxonomy Id: 389348
Other names: C. Protochlamydia naegleriophila, Candidatus Protochlamydia naegleriophila, strain KNic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.