STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNK_1358Conserved hypothetical protein. (498 aa)    
Predicted Functional Partners:
PNK_0913
Uncharacterized protein conserved in bacteria.
  
     0.761
PNK_0563
Anti-sigma F factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
     0.448
rpmF
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.429
PNK_0489
Glycerol uptake facilitator or related permease; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 
 0.418
PNK_1804
Conserved putative secreted protein.
  
     0.417
PNK_0899
Putative phosphoprotein phosphatase.
  
 
   0.414
aspc1
Aspartate aminotransferase.
  
     0.409
PNK_0281
Leucine-rich repeat (LRR) protein.
  
 
  0.407
Your Current Organism:
Protochlamydia naegleriophila
NCBI taxonomy Id: 389348
Other names: C. Protochlamydia naegleriophila, Candidatus Protochlamydia naegleriophila, strain KNic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.