STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNK_1471Serpin family protein; Belongs to the serpin family. (416 aa)    
Predicted Functional Partners:
PNK_1472
Conserved putative membrane protein.
       0.663
copa7
Multicopper oxidase.
   
  0.590
PNK_0340
Udpgalactose-glucose galactosyltransferase.
  
     0.546
PNK_2431
Putative AAA ATPase family protein; Belongs to the AAA ATPase family.
    
  0.521
PNK_0281
Leucine-rich repeat (LRR) protein.
  
 
 0.471
PNK_1473
Conserved hypothetical membrane protein.
       0.445
PNK_2223
F-box/LRR-repeat protein 13.
  
     0.443
Your Current Organism:
Protochlamydia naegleriophila
NCBI taxonomy Id: 389348
Other names: C. Protochlamydia naegleriophila, Candidatus Protochlamydia naegleriophila, strain KNic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.