Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PNK_1775 | PNK_1776 | PNK_1775 | PNK_1776 | Family 2 glycosyl transferase. | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.830 |
PNK_1775 | PNK_1777 | PNK_1775 | PNK_1777 | Family 2 glycosyl transferase. | Glycosyl transferase family 2 p. | 0.746 |
PNK_1775 | PNK_1778 | PNK_1775 | PNK_1778 | Family 2 glycosyl transferase. | Putative galactoside O-acetyltransferase. | 0.699 |
PNK_1775 | PNK_1864 | PNK_1775 | PNK_1864 | Family 2 glycosyl transferase. | Hypothetical protein. | 0.411 |
PNK_1775 | aroA | PNK_1775 | PNK_1233 | Family 2 glycosyl transferase. | Putative 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the EPSP synthase family. Belongs to the type-I 3-dehydroquinase family. | 0.426 |
PNK_1776 | PNK_1775 | PNK_1776 | PNK_1775 | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Family 2 glycosyl transferase. | 0.830 |
PNK_1776 | PNK_1777 | PNK_1776 | PNK_1777 | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Glycosyl transferase family 2 p. | 0.845 |
PNK_1776 | PNK_1778 | PNK_1776 | PNK_1778 | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | Putative galactoside O-acetyltransferase. | 0.912 |
PNK_1777 | PNK_1775 | PNK_1777 | PNK_1775 | Glycosyl transferase family 2 p. | Family 2 glycosyl transferase. | 0.746 |
PNK_1777 | PNK_1776 | PNK_1777 | PNK_1776 | Glycosyl transferase family 2 p. | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.845 |
PNK_1777 | PNK_1778 | PNK_1777 | PNK_1778 | Glycosyl transferase family 2 p. | Putative galactoside O-acetyltransferase. | 0.828 |
PNK_1778 | PNK_1775 | PNK_1778 | PNK_1775 | Putative galactoside O-acetyltransferase. | Family 2 glycosyl transferase. | 0.699 |
PNK_1778 | PNK_1776 | PNK_1778 | PNK_1776 | Putative galactoside O-acetyltransferase. | DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. | 0.912 |
PNK_1778 | PNK_1777 | PNK_1778 | PNK_1777 | Putative galactoside O-acetyltransferase. | Glycosyl transferase family 2 p. | 0.828 |
PNK_1864 | PNK_1775 | PNK_1864 | PNK_1775 | Hypothetical protein. | Family 2 glycosyl transferase. | 0.411 |
PNK_1864 | aroA | PNK_1864 | PNK_1233 | Hypothetical protein. | Putative 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the EPSP synthase family. Belongs to the type-I 3-dehydroquinase family. | 0.405 |
aroA | PNK_1775 | PNK_1233 | PNK_1775 | Putative 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the EPSP synthase family. Belongs to the type-I 3-dehydroquinase family. | Family 2 glycosyl transferase. | 0.426 |
aroA | PNK_1864 | PNK_1233 | PNK_1864 | Putative 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the EPSP synthase family. Belongs to the type-I 3-dehydroquinase family. | Hypothetical protein. | 0.405 |