STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNK_1908Hypothetical protein. (557 aa)    
Predicted Functional Partners:
PNK_1271
Conserved hypothetical protein.
  
    0.695
tolA
tolA protein of Tol-Pal system.
  
  
 0.671
PNK_2420
Conserved hypothetical protein.
  
     0.655
PNK_2333
Conserved hypothetical protein.
  
    0.653
PNK_1145
Hypothetical protein.
  
     0.651
PNK_1534
Hypothetical protein.
  
     0.637
PNK_1201
Hypothetical protein.
  
     0.538
PNK_1200
Hypothetical protein.
  
    0.537
PNK_1254
Methyltransferase domain-containing protein.
  
     0.536
PNK_1117
Hypothetical protein.
  
     0.521
Your Current Organism:
Protochlamydia naegleriophila
NCBI taxonomy Id: 389348
Other names: C. Protochlamydia naegleriophila, Candidatus Protochlamydia naegleriophila, strain KNic
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.