STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA70613.1PFAM: OsmC family protein; KEGG: pap:PSPA7_0059 osmotically inducible protein OsmC. (141 aa)    
Predicted Functional Partners:
ACA70612.1
PFAM: luciferase family protein; KEGG: pen:PSEEN0043 luciferase-like monooxygenase.
 
     0.670
ACA72129.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: pen:PSEEN3763 hypothetical protein.
   
    0.605
ACA70614.1
PFAM: protein of unknown function DUF1161; KEGG: pen:PSEEN0044 hypothetical protein.
       0.581
ACA74485.1
PFAM: Ferritin Dps family protein; KEGG: pen:PSEEN4099 DNA-binding stress protein, Dps family; Belongs to the Dps family.
  
  
 0.540
ACA75589.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.512
ACA73914.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: pen:PSEEN3515 hypothetical protein.
   
  
 0.511
ACA71231.1
PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: psp:PSPPH_4184 osmotically inducible protein, puative.
   
  
 0.505
ACA73349.1
Signal transduction histidine kinase; KEGG: bja:blr2180 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
  
  
 0.505
ACA75570.1
PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: psp:PSPPH_0251 osmotically inducible protein, putative.
   
  
 0.505
ACA70609.1
PFAM: protein of unknown function DUF883 ElaB; KEGG: pen:PSEEN0040 hypothetical protein.
   
  
 0.478
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.