Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACA71032.1 | ACA71456.1 | PputW619_0527 | PputW619_0951 | PFAM: LmbE family protein; KEGG: pen:PSEEN4993 hypothetical protein. | KEGG: pen:PSEEN4478 hypothetical protein. | 0.505 |
ACA71032.1 | ACA71511.1 | PputW619_0527 | PputW619_1006 | PFAM: LmbE family protein; KEGG: pen:PSEEN4993 hypothetical protein. | KEGG: pen:PSEEN1151 transcriptional regulator MvaT, P16 subunit. | 0.710 |
ACA71032.1 | ACA71573.1 | PputW619_0527 | PputW619_1068 | PFAM: LmbE family protein; KEGG: pen:PSEEN4993 hypothetical protein. | PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: pen:PSEEN4295 sigma factor AlgU negative regulatory protein MucA. | 0.630 |
ACA71032.1 | ACA74288.1 | PputW619_0527 | PputW619_3806 | PFAM: LmbE family protein; KEGG: pen:PSEEN4993 hypothetical protein. | TIGRFAM: yecA family protein; KEGG: pen:PSEEN3923 hypothetical protein; Belongs to the UPF0149 family. | 0.548 |
ACA71032.1 | ACA74553.1 | PputW619_0527 | PputW619_4073 | PFAM: LmbE family protein; KEGG: pen:PSEEN4993 hypothetical protein. | PFAM: outer membrane chaperone Skp (OmpH); KEGG: pen:PSEEN4211 outer membrane protein OmpH-like. | 0.675 |
ACA71032.1 | ACA74576.1 | PputW619_0527 | PputW619_4096 | PFAM: LmbE family protein; KEGG: pen:PSEEN4993 hypothetical protein. | KEGG: pen:PSEEN4234 hypothetical protein. | 0.681 |
ACA71032.1 | ACA74916.1 | PputW619_0527 | PputW619_4436 | PFAM: LmbE family protein; KEGG: pen:PSEEN4993 hypothetical protein. | Lipoprotein; KEGG: pen:PSEEN0895 lipoprotein. | 0.737 |
ACA71456.1 | ACA71032.1 | PputW619_0951 | PputW619_0527 | KEGG: pen:PSEEN4478 hypothetical protein. | PFAM: LmbE family protein; KEGG: pen:PSEEN4993 hypothetical protein. | 0.505 |
ACA71456.1 | ACA71511.1 | PputW619_0951 | PputW619_1006 | KEGG: pen:PSEEN4478 hypothetical protein. | KEGG: pen:PSEEN1151 transcriptional regulator MvaT, P16 subunit. | 0.757 |
ACA71456.1 | ACA71513.1 | PputW619_0951 | PputW619_1008 | KEGG: pen:PSEEN4478 hypothetical protein. | PFAM: conserved hypothetical protein; KEGG: pfo:Pfl_4434 hypothetical protein. | 0.591 |
ACA71456.1 | ACA71514.1 | PputW619_0951 | PputW619_1009 | KEGG: pen:PSEEN4478 hypothetical protein. | KEGG: pau:PA14_56040 putative deacetylase. | 0.508 |
ACA71456.1 | ACA71573.1 | PputW619_0951 | PputW619_1068 | KEGG: pen:PSEEN4478 hypothetical protein. | PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: pen:PSEEN4295 sigma factor AlgU negative regulatory protein MucA. | 0.513 |
ACA71456.1 | ACA74288.1 | PputW619_0951 | PputW619_3806 | KEGG: pen:PSEEN4478 hypothetical protein. | TIGRFAM: yecA family protein; KEGG: pen:PSEEN3923 hypothetical protein; Belongs to the UPF0149 family. | 0.443 |
ACA71456.1 | ACA74576.1 | PputW619_0951 | PputW619_4096 | KEGG: pen:PSEEN4478 hypothetical protein. | KEGG: pen:PSEEN4234 hypothetical protein. | 0.543 |
ACA71456.1 | ACA74916.1 | PputW619_0951 | PputW619_4436 | KEGG: pen:PSEEN4478 hypothetical protein. | Lipoprotein; KEGG: pen:PSEEN0895 lipoprotein. | 0.515 |
ACA71456.1 | ACA75073.1 | PputW619_0951 | PputW619_4593 | KEGG: pen:PSEEN4478 hypothetical protein. | KEGG: pen:PSEEN4843 hypothetical protein. | 0.536 |
ACA71511.1 | ACA71032.1 | PputW619_1006 | PputW619_0527 | KEGG: pen:PSEEN1151 transcriptional regulator MvaT, P16 subunit. | PFAM: LmbE family protein; KEGG: pen:PSEEN4993 hypothetical protein. | 0.710 |
ACA71511.1 | ACA71456.1 | PputW619_1006 | PputW619_0951 | KEGG: pen:PSEEN1151 transcriptional regulator MvaT, P16 subunit. | KEGG: pen:PSEEN4478 hypothetical protein. | 0.757 |
ACA71511.1 | ACA71513.1 | PputW619_1006 | PputW619_1008 | KEGG: pen:PSEEN1151 transcriptional regulator MvaT, P16 subunit. | PFAM: conserved hypothetical protein; KEGG: pfo:Pfl_4434 hypothetical protein. | 0.669 |
ACA71511.1 | ACA71514.1 | PputW619_1006 | PputW619_1009 | KEGG: pen:PSEEN1151 transcriptional regulator MvaT, P16 subunit. | KEGG: pau:PA14_56040 putative deacetylase. | 0.681 |
page 1 of 4