STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA72043.1Aspartate transaminase; PFAM: aminotransferase class I and II; KEGG: pen:PSEEN1635 aromatic-amino-acid aminotransferase. (398 aa)    
Predicted Functional Partners:
ACA71881.1
TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: pen:PSEEN1489 bifunctional chorismate mutase/prephenate dehydratase PheA.
    
 0.976
ACA72940.1
KEGG: pen:PSEEN3054 4-hydroxyphenylpyruvate dioxygenase (4HPPD) (HPD) (HPPDase); TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
  
 
 0.964
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
    
 0.953
ACA74261.1
TIGRFAM: phenylalanine-4-hydroxylase; PFAM: aromatic amino acid hydroxylase; KEGG: pen:PSEEN3892 phenylalanine-4-hydroxylase.
  
 
 0.944
ACA72725.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; Xylose isomerase domain protein TIM barrel; KEGG: pen:PSEEN2014 4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.940
hisC
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: pen:PSEEN1108 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
   
 
 0.918
ACA72391.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.915
ACA71945.1
Oxidase; KEGG: pen:PSEEN1531 oxidase.
     
 0.911
ACA72723.1
Aromatic-L-amino-acid decarboxylase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; Pyridoxal-dependent decarboxylase; KEGG: pen:PSEEN2370 tyrosine decarboxylase.
   
 
 0.910
ACA71420.1
KEGG: pen:PSEEN4515 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; Aluminium resistance family protein.
   
 
 0.908
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.