STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA72570.1PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bur:Bcep18194_B2780 amidohydrolase. (560 aa)    
Predicted Functional Partners:
ACA72569.1
PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A5231 major facilitator superfamily (MFS_1) transporter.
 
     0.704
ACA72571.1
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: mlo:mlr0237 hypothetical protein.
       0.532
ACA71471.1
PFAM: FxsA cytoplasmic membrane protein; KEGG: pen:PSEEN4462 hypothetical protein.
  
    0.517
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.