STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA73437.1Domain of unknown function DUF1928; PFAM: Quinohemoprotein amine dehydrogenase A alpha subunit haem binding; Domain of unknown function DUF1927; Domain of unknown function DUF1928; KEGG: pen:PSEEN2977 quinohemoprotein amine dehydrogenase 60 kDa subunit. (542 aa)    
Predicted Functional Partners:
ACA73435.1
PFAM: Quinohemoprotein amine dehydrogenase gamma subunit; KEGG: pen:PSEEN2975 quinohemoprotein amine dehydrogenase gamma subunit.
 
 
 
 0.995
ACA73434.1
KEGG: pen:PSEEN2974 quinohemoprotein amine dehydrogenase 40 kDa subunit.
 
 
 0.964
ACA73441.1
KEGG: pen:PSEEN2818 hypothetical protein.
 
   
 0.942
ACA73436.1
PFAM: Radical SAM domain protein; KEGG: pen:PSEEN2976 hypothetical protein.
 
     0.923
ACA75355.1
TIGRFAM: formaldehyde dehydrogenase, glutathione-independent; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: pen:PSEEN5156 formaldehyde dehydrogenase, glutathione-independent.
     
  0.900
ACA73440.1
PFAM: monooxygenase FAD-binding; KEGG: pen:PSEEN2817 hypothetical protein.
 
  
 0.817
ACA73439.1
KEGG: pen:PSEEN3112 hypothetical protein.
 
    0.761
ACA73442.1
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN2819 ABC efflux transporter, permease/ATP-binding protein.
 
    0.754
ACA71429.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.732
ACA71430.1
Cytochrome b/b6 domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.714
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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