STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA73540.1TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: pfl:PFL_2658 C4-dicarboxylate-binding periplasmic protein. (332 aa)    
Predicted Functional Partners:
ACA73542.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pfl:PFL_2660 C4-dicarboxylate transport protein.
 
 
 0.992
ACA73541.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pfl:PFL_2659 C4-dicarboxylate transporter, putative.
 
  
 0.948
ACA71690.1
TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: psp:PSPPH_0933 TRAP dicarboxylate transporter, DctM subunit.
 
  
 0.831
ACA71691.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pfo:Pfl_3455 tripartite ATP-independent periplasmic transporter, DctQ component.
 
  
 0.803
ACA73537.1
PFAM: MmgE/PrpD family protein; KEGG: pfl:PFL_2649 MmgE/PrpD family protein, putative.
  
  
 0.591
ACA73539.1
PFAM: HpcH/HpaI aldolase; KEGG: pfl:PFL_2651 citrate lyase, beta subunit; Belongs to the HpcH/HpaI aldolase family.
  
    0.585
ACA73536.1
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: psb:Psyr_2176 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal.
  
  
 0.575
ACA73535.1
KEGG: psa:PST_1693 hypothetical protein.
 
    0.573
ACA72665.1
PFAM: Extracellular ligand-binding receptor; KEGG: pmy:Pmen_3837 extracellular ligand-binding receptor.
 
    
 0.565
ACA73538.1
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: psa:PST_1697 putative CaiB/BaiF-family enzyme; Belongs to the CoA-transferase III family.
  
    0.526
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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