STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA73662.1PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pen:PSEEN2705 oxidoreductase, short-chain dehydrogenase/reductase family. (250 aa)    
Predicted Functional Partners:
ACA73661.1
KEGG: pen:PSEEN2706 hypothetical protein.
 
  
 0.986
ACA73663.1
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: pen:PSEEN2704 hypothetical protein.
 
   
 0.976
ACA73664.1
PFAM: protein of unknown function DUF1365; KEGG: pen:PSEEN2703 hypothetical protein.
 
  
 0.976
ACA73666.1
KEGG: pen:PSEEN2701 hypothetical protein.
 
   
 0.894
ACA73660.1
KEGG: psa:PST_1970 sensory box protein, putative; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
 
   
 0.885
ACA73665.1
PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN2702 cyclopropane-fatty-acyl-phospholipid synthase.
 
   
 0.882
ACA74029.1
TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; Taurine catabolism dioxygenase TauD/TfdA; phosphopantetheine-binding; KEGG: pfo:Pfl_1846 peptide synthase.
  
 
 0.873
ACA73659.1
PFAM: regulatory protein MerR; KEGG: psa:PST_1977 transcriptional regulator, MerR family.
 
   
 0.872
ACA73667.1
Lipoprotein; KEGG: pen:PSEEN2738 lipoprotein.
 
    0.843
ACA73491.1
PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: pen:PSEEN2739 photolyase.
 
   
 0.831
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.