STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA74324.1PFAM: FAD dependent oxidoreductase; KEGG: pen:PSEEN3972 oxidoreductase. (435 aa)    
Predicted Functional Partners:
ACA74323.1
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN3971 glutamine synthetase.
 
  
 0.919
ACA73364.1
PFAM: Aldehyde Dehydrogenase_; KEGG: pen:PSEEN2886 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
  0.918
ACA70786.1
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN5297 glutamine synthetase.
 
  
 0.786
ACA73389.1
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN2899 glutamine synthetase.
 
  
 0.783
ACA75358.1
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN5159 sarcosine oxidase (alpha subunit) oxidoreductase protein; Belongs to the GcvT family.
 
 
 0.772
ACA70785.1
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN5299 glutamine synthetase.
 
  
 0.759
ACA70680.1
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN5444 glutamine synthetase.
 
  
 0.755
ACA72348.1
PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN2186 glutamine synthetase.
 
  
 0.751
ACA74222.1
Glutamate--putrescine ligase; PFAM: glutamine synthetase catalytic region; KEGG: pen:PSEEN3851 glutamine synthetase.
 
  
 0.734
ACA70681.1
PFAM: peptidase C26; KEGG: pen:PSEEN5443 glutamine amidotransferase.
 
  
 0.617
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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