STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA74429.1Hypothetical protein. (64 aa)    
Predicted Functional Partners:
ACA74428.1
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mpt:Mpe_A0538 hypothetical protein.
       0.773
ACA74430.1
TIGRFAM: phage holin, lambda family; PFAM: Holin phage lambda; KEGG: pfl:PFL_3770 holin, lambda family.
       0.620
ACA74423.1
TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: rsh:Rsph17029_3318 phage major capsid protein, HK97 family.
       0.470
ACA74424.1
TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: xau:Xaut_3708 phage prohead protease, HK97 family.
       0.470
ACA74425.1
TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: sgl:SG0723 phage portal protein.
       0.470
ACA74426.1
PFAM: Terminase; KEGG: ecs:ECs2251 putative terminase large subunit.
       0.470
ACA74427.1
KEGG: bte:BTH_II1043 hypothetical protein.
       0.470
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.