STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACA74524.1PFAM: Baseplate J family protein; KEGG: pen:PSEEN4161 pyocin R2_PP, baseplate/tail fiber protein. (293 aa)    
Predicted Functional Partners:
ACA74523.1
TIGRFAM: phage tail protein I; PFAM: Inorganic pyrophosphatase; KEGG: pen:PSEEN4160 pyocin R2_PP, tail formation protein GpI.
 
 
 0.994
ACA74525.1
PFAM: GPW/gp25 family protein; KEGG: pen:PSEEN4162 pyocin R2_PP, baseplate protein.
 
 
 0.993
ACA74516.1
PFAM: P2 GpU family protein; KEGG: pen:PSEEN4151 pyocin R2_PP, tail formation protein gpU.
 
 
 0.988
ACA74519.1
TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; KEGG: pen:PSEEN4154 pyocin R2_PP, tail tube protein GpFII.
 
 
 0.987
ACA74522.1
Phage-related tail fibre protein-like protein; KEGG: pst:PSPTO_3398 tail fiber protein H, putative.
 
  
 0.987
ACA74515.1
PFAM: tail X family protein; KEGG: pfl:PFL_2015 tail protein X-related protein.
 
 
 0.986
ACA74520.1
PFAM: tail sheath protein; KEGG: pen:PSEEN4155 pyocin R2_PP, tail sheath protein gpFI.
 
   0.986
ACA74526.1
TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V; KEGG: pen:PSEEN4163 pyocin R2_PP, tail spike protein.
 
  
 0.979
ACA74514.1
PFAM: late control D family protein; KEGG: pen:PSEEN4149 pyocin R2_PP, tail formation GpD.
 
  
 0.972
ACA74521.1
KEGG: pae:PA0621 hypothetical protein.
  
  
 0.921
Your Current Organism:
Pseudomonas putida W619
NCBI taxonomy Id: 390235
Other names: P. putida W619, Pseudomonas putida str. W619, Pseudomonas putida strain W619
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