Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ93413.1 | SEQ93442.1 | SAMN04488023_102192 | SAMN04488023_102193 | ABC-2 type transport system ATP-binding protein. | Iron complex outermembrane recepter protein. | 0.917 |
SEQ93413.1 | SEQ93463.1 | SAMN04488023_102192 | SAMN04488023_102194 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.985 |
SEQ93413.1 | SEQ93492.1 | SAMN04488023_102192 | SAMN04488023_102195 | ABC-2 type transport system ATP-binding protein. | ABC-2 type transport system permease protein. | 0.969 |
SEQ93442.1 | SEQ93413.1 | SAMN04488023_102193 | SAMN04488023_102192 | Iron complex outermembrane recepter protein. | ABC-2 type transport system ATP-binding protein. | 0.917 |
SEQ93442.1 | SEQ93463.1 | SAMN04488023_102193 | SAMN04488023_102194 | Iron complex outermembrane recepter protein. | ABC-2 type transport system permease protein. | 0.955 |
SEQ93442.1 | SEQ93492.1 | SAMN04488023_102193 | SAMN04488023_102195 | Iron complex outermembrane recepter protein. | ABC-2 type transport system permease protein. | 0.958 |
SEQ93442.1 | SER25472.1 | SAMN04488023_102193 | SAMN04488023_10675 | Iron complex outermembrane recepter protein. | FecR family protein. | 0.534 |
SEQ93442.1 | SER48936.1 | SAMN04488023_102193 | SAMN04488023_11014 | Iron complex outermembrane recepter protein. | Uncharacterized iron-regulated membrane protein. | 0.659 |
SEQ93442.1 | SER73873.1 | SAMN04488023_102193 | SAMN04488023_11530 | Iron complex outermembrane recepter protein. | Uncharacterized iron-regulated membrane protein. | 0.648 |
SEQ93442.1 | SES01615.1 | SAMN04488023_102193 | SAMN04488023_12527 | Iron complex outermembrane recepter protein. | Uncharacterized iron-regulated membrane protein. | 0.701 |
SEQ93442.1 | SES13336.1 | SAMN04488023_102193 | SAMN04488023_13431 | Iron complex outermembrane recepter protein. | Uncharacterized iron-regulated membrane protein. | 0.667 |
SEQ93442.1 | SES22353.1 | SAMN04488023_102193 | SAMN04488023_14442 | Iron complex outermembrane recepter protein. | PepSY-associated TM region. | 0.574 |
SEQ93442.1 | SES24271.1 | SAMN04488023_102193 | SAMN04488023_1484 | Iron complex outermembrane recepter protein. | Uncharacterized iron-regulated membrane protein. | 0.629 |
SEQ93463.1 | SEQ93413.1 | SAMN04488023_102194 | SAMN04488023_102192 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.985 |
SEQ93463.1 | SEQ93442.1 | SAMN04488023_102194 | SAMN04488023_102193 | ABC-2 type transport system permease protein. | Iron complex outermembrane recepter protein. | 0.955 |
SEQ93463.1 | SEQ93492.1 | SAMN04488023_102194 | SAMN04488023_102195 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.886 |
SEQ93492.1 | SEQ93413.1 | SAMN04488023_102195 | SAMN04488023_102192 | ABC-2 type transport system permease protein. | ABC-2 type transport system ATP-binding protein. | 0.969 |
SEQ93492.1 | SEQ93442.1 | SAMN04488023_102195 | SAMN04488023_102193 | ABC-2 type transport system permease protein. | Iron complex outermembrane recepter protein. | 0.958 |
SEQ93492.1 | SEQ93463.1 | SAMN04488023_102195 | SAMN04488023_102194 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.886 |
SEQ93492.1 | SES01615.1 | SAMN04488023_102195 | SAMN04488023_12527 | ABC-2 type transport system permease protein. | Uncharacterized iron-regulated membrane protein. | 0.401 |
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