Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEQ94352.1 | SER10336.1 | SAMN04488023_102225 | SAMN04488023_104131 | Branched-chain amino acid aminotransferase. | Aspartate kinase. | 0.928 |
SEQ94352.1 | SER19412.1 | SAMN04488023_102225 | SAMN04488023_105131 | Branched-chain amino acid aminotransferase. | Homoserine dehydrogenase. | 0.900 |
SEQ94352.1 | SER39200.1 | SAMN04488023_102225 | SAMN04488023_108109 | Branched-chain amino acid aminotransferase. | Branched-chain amino acid aminotransferase. | 0.903 |
SEQ94352.1 | metXA | SAMN04488023_102225 | SAMN04488023_105132 | Branched-chain amino acid aminotransferase. | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. | 0.405 |
SEQ94352.1 | thrB | SAMN04488023_102225 | SAMN04488023_104132 | Branched-chain amino acid aminotransferase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.883 |
SER10336.1 | SEQ94352.1 | SAMN04488023_104131 | SAMN04488023_102225 | Aspartate kinase. | Branched-chain amino acid aminotransferase. | 0.928 |
SER10336.1 | SER10779.1 | SAMN04488023_104131 | SAMN04488023_104145 | Aspartate kinase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.984 |
SER10336.1 | SER13377.1 | SAMN04488023_104131 | SAMN04488023_104241 | Aspartate kinase. | Branched-chain amino acid aminotransferase. | 0.928 |
SER10336.1 | SER19412.1 | SAMN04488023_104131 | SAMN04488023_105131 | Aspartate kinase. | Homoserine dehydrogenase. | 0.936 |
SER10336.1 | SER39200.1 | SAMN04488023_104131 | SAMN04488023_108109 | Aspartate kinase. | Branched-chain amino acid aminotransferase. | 0.928 |
SER10336.1 | SER87431.1 | SAMN04488023_104131 | SAMN04488023_11936 | Aspartate kinase. | Cystathionine beta-synthase. | 0.943 |
SER10336.1 | asd | SAMN04488023_104131 | SAMN04488023_107111 | Aspartate kinase. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.994 |
SER10336.1 | dapA | SAMN04488023_104131 | SAMN04488023_13633 | Aspartate kinase. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.930 |
SER10336.1 | metXA | SAMN04488023_104131 | SAMN04488023_105132 | Aspartate kinase. | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. | 0.995 |
SER10336.1 | thrB | SAMN04488023_104131 | SAMN04488023_104132 | Aspartate kinase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.999 |
SER10779.1 | SER10336.1 | SAMN04488023_104145 | SAMN04488023_104131 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Aspartate kinase. | 0.984 |
SER10779.1 | SER19412.1 | SAMN04488023_104145 | SAMN04488023_105131 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Homoserine dehydrogenase. | 0.931 |
SER10779.1 | SER87431.1 | SAMN04488023_104145 | SAMN04488023_11936 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Cystathionine beta-synthase. | 0.947 |
SER10779.1 | asd | SAMN04488023_104145 | SAMN04488023_107111 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.425 |
SER10779.1 | metXA | SAMN04488023_104145 | SAMN04488023_105132 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. | 0.911 |
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