Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER20143.1 | SER24604.1 | SAMN04488023_105171 | SAMN04488023_10638 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.612 |
SER20143.1 | SER40101.1 | SAMN04488023_105171 | SAMN04488023_108150 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.609 |
SER20143.1 | SER85595.1 | SAMN04488023_105171 | SAMN04488023_11877 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.471 |
SER23962.1 | SER40076.1 | SAMN04488023_10611 | SAMN04488023_108149 | Type I phosphodiesterase / nucleotide pyrophosphatase. | Iron complex outermembrane recepter protein. | 0.507 |
SER23962.1 | SER40101.1 | SAMN04488023_10611 | SAMN04488023_108150 | Type I phosphodiesterase / nucleotide pyrophosphatase. | Starch-binding associating with outer membrane. | 0.603 |
SER23962.1 | SER85595.1 | SAMN04488023_10611 | SAMN04488023_11877 | Type I phosphodiesterase / nucleotide pyrophosphatase. | Starch-binding associating with outer membrane. | 0.652 |
SER23962.1 | SER85615.1 | SAMN04488023_10611 | SAMN04488023_11878 | Type I phosphodiesterase / nucleotide pyrophosphatase. | TonB-linked outer membrane protein, SusC/RagA family. | 0.423 |
SER24604.1 | SER20143.1 | SAMN04488023_10638 | SAMN04488023_105171 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.612 |
SER24604.1 | SER40076.1 | SAMN04488023_10638 | SAMN04488023_108149 | Starch-binding associating with outer membrane. | Iron complex outermembrane recepter protein. | 0.674 |
SER24604.1 | SER40101.1 | SAMN04488023_10638 | SAMN04488023_108150 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.608 |
SER24604.1 | SER73235.1 | SAMN04488023_10638 | SAMN04488023_1152 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.631 |
SER24604.1 | SER85615.1 | SAMN04488023_10638 | SAMN04488023_11878 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.808 |
SER24604.1 | SES28720.1 | SAMN04488023_10638 | SAMN04488023_1587 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.692 |
SER39955.1 | SER40101.1 | SAMN04488023_108144 | SAMN04488023_108150 | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | Starch-binding associating with outer membrane. | 0.654 |
SER40076.1 | SER23962.1 | SAMN04488023_108149 | SAMN04488023_10611 | Iron complex outermembrane recepter protein. | Type I phosphodiesterase / nucleotide pyrophosphatase. | 0.507 |
SER40076.1 | SER24604.1 | SAMN04488023_108149 | SAMN04488023_10638 | Iron complex outermembrane recepter protein. | Starch-binding associating with outer membrane. | 0.674 |
SER40076.1 | SER40101.1 | SAMN04488023_108149 | SAMN04488023_108150 | Iron complex outermembrane recepter protein. | Starch-binding associating with outer membrane. | 0.940 |
SER40076.1 | SER52149.1 | SAMN04488023_108149 | SAMN04488023_110126 | Iron complex outermembrane recepter protein. | Starch-binding associating with outer membrane. | 0.710 |
SER40076.1 | SER85595.1 | SAMN04488023_108149 | SAMN04488023_11877 | Iron complex outermembrane recepter protein. | Starch-binding associating with outer membrane. | 0.648 |
SER40101.1 | SER20143.1 | SAMN04488023_108150 | SAMN04488023_105171 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.609 |
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