STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE05836.1CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. (205 aa)    
Predicted Functional Partners:
SDC06138.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
  
 0.810
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
   
 0.692
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
       0.680
SDD83073.1
PAP2 superfamily protein.
 
 
  0.613
SDC91182.1
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.609
SDD52654.1
CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.605
SDC57095.1
Hypothetical protein.
  
 
  0.604
SDE23542.1
Phosphatidylglycerophosphatase.
    
 0.577
SDD40824.1
D-3-phosphoglycerate dehydrogenase.
    
 0.540
SDD19146.1
DNA polymerase-3 subunit epsilon.
  
     0.519
Your Current Organism:
Pedobacter soli
NCBI taxonomy Id: 390242
Other names: DSM 18609, KACC 14939, NBRC 107691, P. soli, Pedobacter soli Kwon et al. 2011, strain 15-51
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.