STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR31474.1Glyoxylase, beta-lactamase superfamily II. (293 aa)    
Predicted Functional Partners:
SFR31472.1
Sulfide:quinone oxidoreductase.
 
  
  0.960
SFR31469.1
Sulfate permease, SulP family.
     0.879
SFR31477.1
Protein of unknown function.
       0.795
SFR36267.1
Hypothetical protein.
 
     0.686
SFR36259.1
Hypothetical protein.
 
     0.667
SFR38502.1
Hypothetical protein.
  
  0.638
SFR36252.1
TIGR01244 family protein.
 
     0.613
SFR42063.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
  0.595
SFR59983.1
2,4-dienoyl-CoA reductase (NADPH2).
  
 
  0.589
SFR31480.1
Cyclic nucleotide-binding protein.
       0.538
Your Current Organism:
Yoonia tamlensis
NCBI taxonomy Id: 390270
Other names: DSM 26879, JCM 14020, KCTC 12722, Loktanella tamlensis, Loktanella tamlensis Lee 2012, Y. tamlensis, strain SSW-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.