STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR32542.1Hypothetical protein. (436 aa)    
Predicted Functional Partners:
SFR32565.1
Tight adherence protein C.
 
    0.949
SFR32570.1
Type II secretion system protein F (GspF).
 
    0.945
SFR32554.1
TPR repeat-containing protein.
 
     0.921
SFR32582.1
Pilus assembly protein CpaE.
 
    0.918
SFR32547.1
Prepilin peptidase CpaA.
 
     0.900
SFR32559.1
TPR repeat-containing protein.
 
     0.892
SFR32576.1
Pilus assembly protein CpaF.
 
     0.879
SFR32597.1
Pilus assembly protein CpaB.
 
    0.844
SFR32591.1
Pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
     0.825
SFR51829.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
    0.790
Your Current Organism:
Yoonia tamlensis
NCBI taxonomy Id: 390270
Other names: DSM 26879, JCM 14020, KCTC 12722, Loktanella tamlensis, Loktanella tamlensis Lee 2012, Y. tamlensis, strain SSW-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.