Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR32293.1 | SFR32299.1 | SAMN04488005_0283 | SAMN04488005_0284 | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | Cytochrome c oxidase cbb3-type subunit 2. | 0.999 |
SFR32293.1 | SFR32672.1 | SAMN04488005_0283 | SAMN04488005_0352 | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | Cytochrome c oxidase subunit 3. | 0.884 |
SFR32293.1 | SFR32927.1 | SAMN04488005_0283 | SAMN04488005_0402 | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | Nitric oxide reductase, NorC subunit apoprotein. | 0.951 |
SFR32293.1 | SFR53523.1 | SAMN04488005_0283 | SAMN04488005_2670 | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.949 |
SFR32293.1 | SFR53534.1 | SAMN04488005_0283 | SAMN04488005_2671 | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.971 |
SFR32299.1 | SFR32293.1 | SAMN04488005_0284 | SAMN04488005_0283 | Cytochrome c oxidase cbb3-type subunit 2. | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.999 |
SFR32299.1 | SFR32672.1 | SAMN04488005_0284 | SAMN04488005_0352 | Cytochrome c oxidase cbb3-type subunit 2. | Cytochrome c oxidase subunit 3. | 0.862 |
SFR32299.1 | SFR32927.1 | SAMN04488005_0284 | SAMN04488005_0402 | Cytochrome c oxidase cbb3-type subunit 2. | Nitric oxide reductase, NorC subunit apoprotein. | 0.954 |
SFR32299.1 | SFR53523.1 | SAMN04488005_0284 | SAMN04488005_2670 | Cytochrome c oxidase cbb3-type subunit 2. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.971 |
SFR32299.1 | SFR53534.1 | SAMN04488005_0284 | SAMN04488005_2671 | Cytochrome c oxidase cbb3-type subunit 2. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.970 |
SFR32672.1 | SFR32293.1 | SAMN04488005_0352 | SAMN04488005_0283 | Cytochrome c oxidase subunit 3. | Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.884 |
SFR32672.1 | SFR32299.1 | SAMN04488005_0352 | SAMN04488005_0284 | Cytochrome c oxidase subunit 3. | Cytochrome c oxidase cbb3-type subunit 2. | 0.862 |
SFR32672.1 | SFR32927.1 | SAMN04488005_0352 | SAMN04488005_0402 | Cytochrome c oxidase subunit 3. | Nitric oxide reductase, NorC subunit apoprotein. | 0.959 |
SFR32672.1 | SFR53523.1 | SAMN04488005_0352 | SAMN04488005_2670 | Cytochrome c oxidase subunit 3. | Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.996 |
SFR32672.1 | SFR53534.1 | SAMN04488005_0352 | SAMN04488005_2671 | Cytochrome c oxidase subunit 3. | Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.999 |
SFR32899.1 | SFR32903.1 | SAMN04488005_0397 | SAMN04488005_0398 | Hypothetical protein. | Hypothetical protein. | 0.959 |
SFR32899.1 | SFR32909.1 | SAMN04488005_0397 | SAMN04488005_0399 | Hypothetical protein. | Nitric oxide reductase NorD protein. | 0.980 |
SFR32899.1 | SFR32915.1 | SAMN04488005_0397 | SAMN04488005_0400 | Hypothetical protein. | Nitric oxide reductase NorQ protein. | 0.945 |
SFR32899.1 | SFR32921.1 | SAMN04488005_0397 | SAMN04488005_0401 | Hypothetical protein. | Nitric oxide reductase, NorB subunit apoprotein; Belongs to the heme-copper respiratory oxidase family. | 0.974 |
SFR32899.1 | SFR32927.1 | SAMN04488005_0397 | SAMN04488005_0402 | Hypothetical protein. | Nitric oxide reductase, NorC subunit apoprotein. | 0.954 |
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