Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFR34631.1 | SFR34636.1 | SAMN04488005_0683 | SAMN04488005_0684 | Methyltransferase domain-containing protein. | Predicted membrane protein. | 0.752 |
SFR34631.1 | SFR34643.1 | SAMN04488005_0683 | SAMN04488005_0685 | Methyltransferase domain-containing protein. | Putative transcriptional regulator. | 0.653 |
SFR34631.1 | SFR34650.1 | SAMN04488005_0683 | SAMN04488005_0686 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.653 |
SFR34631.1 | SFR34655.1 | SAMN04488005_0683 | SAMN04488005_0687 | Methyltransferase domain-containing protein. | Protein of unknown function. | 0.435 |
SFR34631.1 | SFR34662.1 | SAMN04488005_0683 | SAMN04488005_0688 | Methyltransferase domain-containing protein. | Hypothetical protein. | 0.435 |
SFR34636.1 | SFR34631.1 | SAMN04488005_0684 | SAMN04488005_0683 | Predicted membrane protein. | Methyltransferase domain-containing protein. | 0.752 |
SFR34636.1 | SFR34643.1 | SAMN04488005_0684 | SAMN04488005_0685 | Predicted membrane protein. | Putative transcriptional regulator. | 0.801 |
SFR34636.1 | SFR34650.1 | SAMN04488005_0684 | SAMN04488005_0686 | Predicted membrane protein. | Hypothetical protein. | 0.681 |
SFR34636.1 | SFR34655.1 | SAMN04488005_0684 | SAMN04488005_0687 | Predicted membrane protein. | Protein of unknown function. | 0.446 |
SFR34636.1 | SFR34662.1 | SAMN04488005_0684 | SAMN04488005_0688 | Predicted membrane protein. | Hypothetical protein. | 0.446 |
SFR34636.1 | SFR34669.1 | SAMN04488005_0684 | SAMN04488005_0689 | Predicted membrane protein. | Lipoprotein-releasing system permease protein. | 0.405 |
SFR34636.1 | lolD | SAMN04488005_0684 | SAMN04488005_0690 | Predicted membrane protein. | Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.405 |
SFR34643.1 | SFR34631.1 | SAMN04488005_0685 | SAMN04488005_0683 | Putative transcriptional regulator. | Methyltransferase domain-containing protein. | 0.653 |
SFR34643.1 | SFR34636.1 | SAMN04488005_0685 | SAMN04488005_0684 | Putative transcriptional regulator. | Predicted membrane protein. | 0.801 |
SFR34643.1 | SFR34650.1 | SAMN04488005_0685 | SAMN04488005_0686 | Putative transcriptional regulator. | Hypothetical protein. | 0.791 |
SFR34643.1 | SFR34655.1 | SAMN04488005_0685 | SAMN04488005_0687 | Putative transcriptional regulator. | Protein of unknown function. | 0.505 |
SFR34643.1 | SFR34662.1 | SAMN04488005_0685 | SAMN04488005_0688 | Putative transcriptional regulator. | Hypothetical protein. | 0.505 |
SFR34643.1 | SFR34669.1 | SAMN04488005_0685 | SAMN04488005_0689 | Putative transcriptional regulator. | Lipoprotein-releasing system permease protein. | 0.456 |
SFR34643.1 | lolD | SAMN04488005_0685 | SAMN04488005_0690 | Putative transcriptional regulator. | Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.456 |
SFR34643.1 | mobA | SAMN04488005_0685 | SAMN04488005_3081 | Putative transcriptional regulator. | Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. | 0.435 |
page 1 of 3