STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR36779.1Xanthine dehydrogenase accessory factor. (321 aa)    
Predicted Functional Partners:
SFR36794.1
Carbon-monoxide dehydrogenase medium subunit.
 
 
 0.967
SFR36787.1
Carbon-monoxide dehydrogenase small subunit.
 
 
 0.947
SFR39387.1
CTP:molybdopterin cytidylyltransferase MocA; Manually curated.
 
 
 0.911
SFR45630.1
Carbon-monoxide dehydrogenase large subunit.
 
 
 0.882
SFR32097.1
Xanthine dehydrogenase small subunit.
 
  
 0.671
SFR34469.1
Hypothetical protein.
 
     0.638
SFR32092.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
  
 0.627
SFR32023.1
OHCU decarboxylase.
    
  0.415
Your Current Organism:
Yoonia tamlensis
NCBI taxonomy Id: 390270
Other names: DSM 26879, JCM 14020, KCTC 12722, Loktanella tamlensis, Loktanella tamlensis Lee 2012, Y. tamlensis, strain SSW-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.