STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR40625.1Hypothetical protein. (79 aa)    
Predicted Functional Partners:
SFR40631.1
Hypothetical protein.
       0.773
SFR40638.1
Hypothetical protein.
       0.773
SFR40643.1
Hypothetical protein.
       0.773
SFR40649.1
Hypothetical protein.
       0.773
SFR40655.1
Hypothetical protein.
       0.773
SFR40661.1
Hypothetical protein.
       0.773
SFR40668.1
Hypothetical protein.
       0.773
SFR40674.1
Hypothetical protein.
       0.773
SFR40681.1
HNH endonuclease.
       0.773
SFR40688.1
Hypothetical protein; Belongs to the 'phage' integrase family.
       0.477
Your Current Organism:
Yoonia tamlensis
NCBI taxonomy Id: 390270
Other names: DSM 26879, JCM 14020, KCTC 12722, Loktanella tamlensis, Loktanella tamlensis Lee 2012, Y. tamlensis, strain SSW-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.