Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SFR41566.1Phage tail tape measure protein, lambda family. (219 aa)    
Predicted Functional Partners:
SFR41543.1
Putative phage cell wall peptidase, NlpC/P60 family.
 
   0.972
SFR41582.1
Phage tail tube protein, GTA-gp10.
 
    0.968
SFR41558.1
TIGR02217 family protein.
 
    0.967
SFR41614.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
 
   0.965
SFR41590.1
Phage major tail protein, TP901-1 family.
 
     0.963
SFR41550.1
Phage conserved hypothetical protein BR0599.
 
     0.962
SFR41534.1
Putative phage tail protein.
 
     0.960
SFR41574.1
Phage conserved hypothetical protein.
 
     0.957
SFR41598.1
Protein of unknown function.
 
    0.955
SFR41606.1
Phage head-tail adaptor, putative, SPP1 family.
 
     0.951
Your Current Organism:
Yoonia tamlensis
NCBI taxonomy Id: 390270
Other names: DSM 26879, JCM 14020, KCTC 12722, Loktanella tamlensis, Loktanella tamlensis Lee 2012, Y. tamlensis, strain SSW-35
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