STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR43651.1Hypothetical protein. (189 aa)    
Predicted Functional Partners:
SFR43643.1
Flp pilus assembly protein TadG.
 
    0.973
SFR43660.1
Flp pilus assembly protein TadG.
 
    0.970
SFR32597.1
Pilus assembly protein CpaB.
 
    0.946
SFR32582.1
Pilus assembly protein CpaE.
 
  
 0.930
SFR32570.1
Type II secretion system protein F (GspF).
 
  
 0.917
SFR32607.1
Hypothetical protein.
 
  
 0.812
SFR32565.1
Tight adherence protein C.
 
    0.780
SFR42808.1
Cell division protein DedD (protein involved in septation).
 
     0.757
SFR32591.1
Pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
  
 0.749
SFR32542.1
Hypothetical protein.
 
    0.748
Your Current Organism:
Yoonia tamlensis
NCBI taxonomy Id: 390270
Other names: DSM 26879, JCM 14020, KCTC 12722, Loktanella tamlensis, Loktanella tamlensis Lee 2012, Y. tamlensis, strain SSW-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.