STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR44106.13-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. (731 aa)    
Predicted Functional Partners:
SFR31605.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
SFR44089.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
SFR57001.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
SFR60263.1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
SFR44073.1
Hypothetical protein.
 
 0.994
SFR60843.1
Hypothetical protein.
 
 0.988
SFR58933.1
Hypothetical protein.
 
 0.986
SFR56862.1
(2S)-methylsuccinyl-CoA dehydrogenase.
 
 0.983
SFR34488.1
propionyl-CoA carboxylase carboxyltransferase subunit.
  
 
 0.967
SFR37520.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.967
Your Current Organism:
Yoonia tamlensis
NCBI taxonomy Id: 390270
Other names: DSM 26879, JCM 14020, KCTC 12722, Loktanella tamlensis, Loktanella tamlensis Lee 2012, Y. tamlensis, strain SSW-35
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