STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR44243.1Type IV pili methyl-accepting chemotaxis transducer N-term. (306 aa)    
Predicted Functional Partners:
SFR52151.1
Hypothetical protein.
  
     0.727
SFR41306.1
LysM domain-containing protein.
 
     0.707
SFR36000.1
Hypothetical protein.
  
     0.700
SFR37238.1
Polar amino acid transport system substrate-binding protein.
  
     0.680
SFR34912.1
Hypothetical protein.
  
     0.670
SFR34919.1
Coenzyme PQQ synthesis protein D (PqqD).
  
     0.647
SFR31589.1
ABC-type phosphate transport system, substrate-binding protein.
  
     0.618
SFR59385.1
Conserved hypothetical protein.
  
     0.615
SFR38739.1
Surface polysaccharide O-acyltransferase, integral membrane enzyme.
  
     0.610
SFR45891.1
CAAX protease self-immunity.
  
     0.607
Your Current Organism:
Yoonia tamlensis
NCBI taxonomy Id: 390270
Other names: DSM 26879, JCM 14020, KCTC 12722, Loktanella tamlensis, Loktanella tamlensis Lee 2012, Y. tamlensis, strain SSW-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.