STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFR44502.1Phage shock protein A (PspA) family protein. (226 aa)    
Predicted Functional Partners:
SFR44491.1
Transcriptional regulator, TetR family.
 
    0.906
SFR44526.1
Phosphatidate cytidylyltransferase.
 
     0.759
SFR44518.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
     0.744
SFR44511.1
Hypothetical protein.
       0.741
SFR36558.1
Hypothetical protein.
 
     0.586
SFR31758.1
Hypothetical protein; Manually curated.
 
     0.572
SFR60412.1
FHA domain-containing protein.
  
   
 0.498
SFR60440.1
50S ribosome-binding GTPase.
  
     0.470
SFR60451.1
Dynamin family protein.
  
    0.439
SFR44482.1
MFS transporter, DHA1 family, tetracycline resistance protein.
       0.417
Your Current Organism:
Yoonia tamlensis
NCBI taxonomy Id: 390270
Other names: DSM 26879, JCM 14020, KCTC 12722, Loktanella tamlensis, Loktanella tamlensis Lee 2012, Y. tamlensis, strain SSW-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.